Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 AL390961.4-201ENST00000623958 2535 ntBASIC14.49□□□□□ -0.09
RIF1Q5UIP0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 VENTXP4-201ENST00000449029 958 ntBASIC14.49□□□□□ -0.09
RIF1Q5UIP0 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 LINC02199-201ENST00000506655 2702 ntBASIC14.49□□□□□ -0.09
RIF1Q5UIP0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 RN7SKP109-201ENST00000410592 316 ntBASIC14.49□□□□□ -0.09
RIF1Q5UIP0 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 RN7SL173P-201ENST00000461853 292 ntBASIC14.49□□□□□ -0.09
RIF1Q5UIP0 RN7SL582P-201ENST00000491078 279 ntBASIC14.49□□□□□ -0.09
RIF1Q5UIP0 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.49□□□□□ -0.09
RIF1Q5UIP0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AL157414.3-201ENST00000624276 1954 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 BX088651.3-201ENST00000418155 352 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 RN7SL602P-201ENST00000578326 324 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 RN7SL718P-201ENST00000581254 303 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AL160191.2-201ENST00000603975 601 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AL450487.2-201ENST00000615934 407 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AC021305.1-201ENST00000520656 1514 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AC008536.3-201ENST00000623282 1599 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AC006058.4-201ENST00000624016 1670 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 MST1L-201ENST00000442552 2185 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms