Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC144BQ3MJ40 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 AC020907.1-201ENST00000616460 1350 ntBASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 AC026410.3-201ENST00000514280 936 ntBASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 DRD5P1-201ENST00000456605 1438 ntBASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC144BQ3MJ40 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 AC245100.3-201ENST00000441281 285 ntBASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 YBX1P6-201ENST00000442962 1002 ntBASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 AC079316.1-201ENST00000548397 411 ntBASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 AC010328.2-201ENST00000597698 1111 ntBASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC144BQ3MJ40 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC144BQ3MJ40 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms