Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 RN7SKP214-201ENST00000364208 315 ntBASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 FAM58BP-201ENST00000439056 645 ntBASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AC009779.1-201ENST00000551138 283 ntBASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 U62317.3-201ENST00000608319 855 ntBASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 AL136295.7-201ENST00000619226 1200 ntBASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 MIR6727-201ENST00000620702 65 ntBASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM71Q2Q1W2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 AC006335.1-201ENST00000445200 547 ntBASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 AC234782.1-201ENST00000451950 919 ntBASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 AC008825.2-201ENST00000603374 718 ntBASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 AC092978.1-202ENST00000637590 1327 ntBASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM71Q2Q1W2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 FAM90A7P-201ENST00000382628 1395 ntBASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 FAM90A23P-201ENST00000400136 1395 ntBASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 AC084018.2-201ENST00000613093 2607 ntBASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms