Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNA1P78396 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNA1P78396 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 AC009093.2-202ENST00000620513 2079 ntBASIC17.16■□□□□ 0.34
CCNA1P78396 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNA1P78396 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.16■□□□□ 0.34
CCNA1P78396 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNA1P78396 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.16■□□□□ 0.34
CCNA1P78396 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 AL160314.3-201ENST00000556041 767 ntBASIC17.16■□□□□ 0.34
CCNA1P78396 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNA1P78396 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.16■□□□□ 0.34
CCNA1P78396 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNA1P78396 AC008805.1-201ENST00000590892 364 ntBASIC17.16■□□□□ 0.34
CCNA1P78396 AC132192.2-201ENST00000596206 1147 ntBASIC17.16■□□□□ 0.34
CCNA1P78396 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 U62317.3-201ENST00000608319 855 ntBASIC17.16■□□□□ 0.34
CCNA1P78396 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNA1P78396 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
CCNA1P78396 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNA1P78396 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNA1P78396 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNA1P78396 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNA1P78396 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNA1P78396 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCNA1P78396 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 AC006480.2-201ENST00000609770 1337 ntBASIC17.16■□□□□ 0.34
CCNA1P78396 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNA1P78396 AC084018.2-201ENST00000613093 2607 ntBASIC17.16■□□□□ 0.34
CCNA1P78396 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNA1P78396 CICP11-201ENST00000434745 2827 ntBASIC17.16■□□□□ 0.34
CCNA1P78396 REXO1L4P-201ENST00000605109 1937 ntBASIC17.15■□□□□ 0.34
CCNA1P78396 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNA1P78396 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNA1P78396 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNA1P78396 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CCNA1P78396 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNA1P78396 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CCNA1P78396 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.15■□□□□ 0.34
CCNA1P78396 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCNA1P78396 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 ISCA2P1-201ENST00000425548 448 ntBASIC17.15■□□□□ 0.34
CCNA1P78396 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.15■□□□□ 0.34
CCNA1P78396 HLA-J-204ENST00000495278 958 ntBASIC17.15■□□□□ 0.34
CCNA1P78396 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 AC009779.1-201ENST00000551138 283 ntBASIC17.15■□□□□ 0.34
CCNA1P78396 AC009884.2-201ENST00000603110 324 ntBASIC17.15■□□□□ 0.34
CCNA1P78396 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNA1P78396 AF254983.2-201ENST00000612331 135 ntBASIC17.15■□□□□ 0.34
CCNA1P78396 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCNA1P78396 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCNA1P78396 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
CCNA1P78396 FLJ16779-201ENST00000612722 7638 ntBASIC17.15■□□□□ 0.34
CCNA1P78396 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNA1P78396 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNA1P78396 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNA1P78396 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNA1P78396 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNA1P78396 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNA1P78396 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNA1P78396 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CCNA1P78396 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCNA1P78396 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CCNA1P78396 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNA1P78396 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNA1P78396 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNA1P78396 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNA1P78396 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNA1P78396 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNA1P78396 AC006058.4-201ENST00000624016 1670 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms