Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ASIC1P78348 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ASIC1P78348 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ASIC1P78348 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.03■□□□□ 0.32
ASIC1P78348 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.03■□□□□ 0.32
ASIC1P78348 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.03■□□□□ 0.32
ASIC1P78348 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 DFFBP1-201ENST00000433250 979 ntBASIC17.03■□□□□ 0.32
ASIC1P78348 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.03■□□□□ 0.32
ASIC1P78348 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.03■□□□□ 0.32
ASIC1P78348 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.03■□□□□ 0.32
ASIC1P78348 AL132655.2-201ENST00000596276 594 ntBASIC17.03■□□□□ 0.32
ASIC1P78348 AC004233.3-201ENST00000607794 1269 ntBASIC17.03■□□□□ 0.32
ASIC1P78348 AC099568.2-201ENST00000609194 695 ntBASIC17.03■□□□□ 0.32
ASIC1P78348 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.03■□□□□ 0.32
ASIC1P78348 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ASIC1P78348 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
ASIC1P78348 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ASIC1P78348 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ASIC1P78348 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.03■□□□□ 0.32
ASIC1P78348 REXO1L5P-201ENST00000622260 2098 ntBASIC17.03■□□□□ 0.32
ASIC1P78348 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ASIC1P78348 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
ASIC1P78348 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
ASIC1P78348 AL158070.2-201ENST00000623713 1621 ntBASIC17.03■□□□□ 0.32
ASIC1P78348 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.03■□□□□ 0.32
ASIC1P78348 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ASIC1P78348 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ASIC1P78348 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 AL513477.1-201ENST00000602865 2407 ntBASIC17.02■□□□□ 0.32
ASIC1P78348 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.02■□□□□ 0.32
ASIC1P78348 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ASIC1P78348 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ASIC1P78348 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ASIC1P78348 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.02■□□□□ 0.32
ASIC1P78348 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.02■□□□□ 0.32
ASIC1P78348 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.02■□□□□ 0.32
ASIC1P78348 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ASIC1P78348 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
ASIC1P78348 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.02■□□□□ 0.32
ASIC1P78348 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.02■□□□□ 0.32
ASIC1P78348 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.02■□□□□ 0.32
ASIC1P78348 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ASIC1P78348 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.02■□□□□ 0.32
ASIC1P78348 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.02■□□□□ 0.32
ASIC1P78348 AC120045.2-201ENST00000567334 178 ntBASIC17.02■□□□□ 0.32
ASIC1P78348 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.02■□□□□ 0.32
ASIC1P78348 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.02■□□□□ 0.32
ASIC1P78348 AC093726.1-201ENST00000608064 963 ntBASIC17.02■□□□□ 0.32
ASIC1P78348 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.02■□□□□ 0.32
ASIC1P78348 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.02■□□□□ 0.32
ASIC1P78348 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.02■□□□□ 0.32
ASIC1P78348 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ASIC1P78348 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ASIC1P78348 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ASIC1P78348 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ASIC1P78348 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.02■□□□□ 0.31
ASIC1P78348 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ASIC1P78348 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.02■□□□□ 0.31
ASIC1P78348 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.02■□□□□ 0.31
ASIC1P78348 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.02■□□□□ 0.31
ASIC1P78348 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ASIC1P78348 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.01■□□□□ 0.31
ASIC1P78348 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ASIC1P78348 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.01■□□□□ 0.31
ASIC1P78348 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ASIC1P78348 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ASIC1P78348 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.01■□□□□ 0.31
ASIC1P78348 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ASIC1P78348 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ASIC1P78348 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
ASIC1P78348 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.01■□□□□ 0.31
ASIC1P78348 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ASIC1P78348 AC007541.1-201ENST00000570282 1469 ntBASIC17.01■□□□□ 0.31
ASIC1P78348 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.01■□□□□ 0.31
ASIC1P78348 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms