Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 ACTBP8-201ENST00000403258 1108 ntBASIC14.35□□□□□ -0.11
TRA2BP62995 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.35□□□□□ -0.11
TRA2BP62995 KRT18P25-201ENST00000508931 1278 ntBASIC14.35□□□□□ -0.11
TRA2BP62995 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRA2BP62995 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.35□□□□□ -0.11
TRA2BP62995 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.35□□□□□ -0.11
TRA2BP62995 AC009486.1-201ENST00000569860 813 ntBASIC14.35□□□□□ -0.11
TRA2BP62995 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.35□□□□□ -0.11
TRA2BP62995 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.35□□□□□ -0.11
TRA2BP62995 AC008494.3-201ENST00000606615 944 ntBASIC14.35□□□□□ -0.11
TRA2BP62995 AC005252.2-201ENST00000624630 1141 ntBASIC14.35□□□□□ -0.11
TRA2BP62995 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRA2BP62995 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRA2BP62995 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRA2BP62995 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRA2BP62995 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.35□□□□□ -0.11
TRA2BP62995 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRA2BP62995 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRA2BP62995 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TRA2BP62995 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRA2BP62995 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.34□□□□□ -0.11
TRA2BP62995 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRA2BP62995 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.34□□□□□ -0.11
TRA2BP62995 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.34□□□□□ -0.11
TRA2BP62995 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
TRA2BP62995 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.34□□□□□ -0.11
TRA2BP62995 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.34□□□□□ -0.11
TRA2BP62995 AC190387.1-201ENST00000551683 408 ntBASIC14.34□□□□□ -0.11
TRA2BP62995 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.34□□□□□ -0.11
TRA2BP62995 CTBP2P3-201ENST00000585629 1255 ntBASIC14.34□□□□□ -0.11
TRA2BP62995 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.34□□□□□ -0.11
TRA2BP62995 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
TRA2BP62995 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 WFDC1-204ENST00000613603 549 ntBASIC14.34□□□□□ -0.11
TRA2BP62995 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRA2BP62995 CU634019.7-201ENST00000624153 1185 ntBASIC14.34□□□□□ -0.11
TRA2BP62995 FP236241.2-201ENST00000624906 1185 ntBASIC14.34□□□□□ -0.11
TRA2BP62995 AC023090.2-201ENST00000625182 2110 ntBASIC14.34□□□□□ -0.11
TRA2BP62995 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRA2BP62995 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.34□□□□□ -0.11
TRA2BP62995 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.34□□□□□ -0.11
TRA2BP62995 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.34□□□□□ -0.11
TRA2BP62995 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 LINC02228-204ENST00000642115 2962 ntBASIC14.34□□□□□ -0.11
TRA2BP62995 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.34□□□□□ -0.11
TRA2BP62995 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRA2BP62995 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TRA2BP62995 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRA2BP62995 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.33□□□□□ -0.11
TRA2BP62995 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRA2BP62995 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRA2BP62995 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRA2BP62995 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRA2BP62995 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
TRA2BP62995 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRA2BP62995 OR2I1P-209ENST00000641730 5365 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms