Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S1P61966 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.3■□□□□ 0.04
AP1S1P61966 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.3■□□□□ 0.04
AP1S1P61966 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S1P61966 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.3■□□□□ 0.04
AP1S1P61966 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S1P61966 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
AP1S1P61966 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP1S1P61966 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S1P61966 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S1P61966 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S1P61966 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP1S1P61966 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP1S1P61966 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 AC006058.4-201ENST00000624016 1670 ntBASIC15.29■□□□□ 0.04
AP1S1P61966 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S1P61966 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
AP1S1P61966 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S1P61966 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.29■□□□□ 0.04
AP1S1P61966 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.29■□□□□ 0.04
AP1S1P61966 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 RNA5SP486-201ENST00000515961 83 ntBASIC15.29■□□□□ 0.04
AP1S1P61966 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.29■□□□□ 0.04
AP1S1P61966 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.29■□□□□ 0.04
AP1S1P61966 AP000812.2-201ENST00000538934 718 ntBASIC15.29■□□□□ 0.04
AP1S1P61966 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
AP1S1P61966 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
AP1S1P61966 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
AP1S1P61966 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
AP1S1P61966 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S1P61966 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S1P61966 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP1S1P61966 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S1P61966 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S1P61966 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
AP1S1P61966 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
AP1S1P61966 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 OR8S1-201ENST00000310194 1080 ntBASIC15.28■□□□□ 0.04
AP1S1P61966 TPM3P8-201ENST00000330554 643 ntBASIC15.28■□□□□ 0.04
AP1S1P61966 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 CNN2P8-201ENST00000421872 913 ntBASIC15.28■□□□□ 0.04
AP1S1P61966 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.28■□□□□ 0.04
AP1S1P61966 RPL7P3-201ENST00000441388 714 ntBASIC15.28■□□□□ 0.04
AP1S1P61966 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.28■□□□□ 0.04
AP1S1P61966 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S1P61966 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
AP1S1P61966 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.28■□□□□ 0.04
AP1S1P61966 HILS1-202ENST00000545329 423 ntBASIC15.28■□□□□ 0.04
AP1S1P61966 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S1P61966 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.28■□□□□ 0.04
AP1S1P61966 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 AC244669.2-201ENST00000612320 853 ntBASIC15.28■□□□□ 0.04
AP1S1P61966 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S1P61966 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S1P61966 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
AP1S1P61966 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms