Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 KRT8P35-201ENST00000483942 1338 ntBASIC14.62□□□□□ -0.07
VSX2P58304 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VSX2P58304 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VSX2P58304 AC023024.2-201ENST00000623561 1993 ntBASIC14.62□□□□□ -0.07
VSX2P58304 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.62□□□□□ -0.07
VSX2P58304 AC073347.1-201ENST00000421633 2643 ntBASIC14.62□□□□□ -0.07
VSX2P58304 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VSX2P58304 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
VSX2P58304 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VSX2P58304 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VSX2P58304 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.61□□□□□ -0.07
VSX2P58304 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VSX2P58304 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VSX2P58304 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VSX2P58304 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.61□□□□□ -0.07
VSX2P58304 ARSEP1-201ENST00000420443 635 ntBASIC14.61□□□□□ -0.07
VSX2P58304 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.61□□□□□ -0.07
VSX2P58304 ATP5G2P4-201ENST00000442175 420 ntBASIC14.61□□□□□ -0.07
VSX2P58304 AC114812.1-204ENST00000449669 728 ntBASIC14.61□□□□□ -0.07
VSX2P58304 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.61□□□□□ -0.07
VSX2P58304 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VSX2P58304 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.61□□□□□ -0.07
VSX2P58304 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.61□□□□□ -0.07
VSX2P58304 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.61□□□□□ -0.07
VSX2P58304 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.61□□□□□ -0.07
VSX2P58304 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VSX2P58304 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.61□□□□□ -0.07
VSX2P58304 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.61□□□□□ -0.07
VSX2P58304 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VSX2P58304 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.6□□□□□ -0.07
VSX2P58304 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.6□□□□□ -0.07
VSX2P58304 AL359258.3-201ENST00000622910 2331 ntBASIC14.6□□□□□ -0.07
VSX2P58304 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 AL161772.1-201ENST00000610494 4412 ntBASIC14.6□□□□□ -0.07
VSX2P58304 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.6□□□□□ -0.07
VSX2P58304 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.6□□□□□ -0.07
VSX2P58304 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.6□□□□□ -0.07
VSX2P58304 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 AL645937.2-201ENST00000396808 931 ntBASIC14.6□□□□□ -0.07
VSX2P58304 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VSX2P58304 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 GHSR-202ENST00000427970 912 ntBASIC14.6□□□□□ -0.07
VSX2P58304 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.6□□□□□ -0.07
VSX2P58304 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
VSX2P58304 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.6□□□□□ -0.07
VSX2P58304 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.6□□□□□ -0.07
VSX2P58304 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.6□□□□□ -0.07
VSX2P58304 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.6□□□□□ -0.07
VSX2P58304 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.6□□□□□ -0.07
VSX2P58304 AC017083.2-201ENST00000608069 979 ntBASIC14.6□□□□□ -0.07
VSX2P58304 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VSX2P58304 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.6□□□□□ -0.07
VSX2P58304 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VSX2P58304 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.6□□□□□ -0.07
VSX2P58304 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VSX2P58304 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.6□□□□□ -0.07
VSX2P58304 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.6□□□□□ -0.07
VSX2P58304 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms