Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.72■□□□□ 0.27
LBX1P52954 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LBX1P52954 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LBX1P52954 AC105020.1-201ENST00000435356 2205 ntBASIC16.72■□□□□ 0.27
LBX1P52954 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
LBX1P52954 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LBX1P52954 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
LBX1P52954 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.71■□□□□ 0.27
LBX1P52954 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LBX1P52954 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 GEMIN8P4-201ENST00000380526 729 ntBASIC16.71■□□□□ 0.27
LBX1P52954 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.71■□□□□ 0.27
LBX1P52954 AL080243.1-201ENST00000423293 1060 ntBASIC16.71■□□□□ 0.27
LBX1P52954 AC136604.1-202ENST00000425471 771 ntBASIC16.71■□□□□ 0.27
LBX1P52954 IFNWP2-201ENST00000431203 580 ntBASIC16.71■□□□□ 0.27
LBX1P52954 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.71■□□□□ 0.27
LBX1P52954 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC16.71■□□□□ 0.27
LBX1P52954 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.71■□□□□ 0.27
LBX1P52954 ALG3P1-201ENST00000508806 1114 ntBASIC16.71■□□□□ 0.27
LBX1P52954 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.71■□□□□ 0.27
LBX1P52954 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.71■□□□□ 0.27
LBX1P52954 KRT8P1-201ENST00000557533 1207 ntBASIC16.71■□□□□ 0.27
LBX1P52954 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.71■□□□□ 0.27
LBX1P52954 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC16.71■□□□□ 0.27
LBX1P52954 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
LBX1P52954 FKBP4P8-201ENST00000610931 1369 ntBASIC16.71■□□□□ 0.27
LBX1P52954 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LBX1P52954 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
LBX1P52954 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LBX1P52954 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.71■□□□□ 0.27
LBX1P52954 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LBX1P52954 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC16.7■□□□□ 0.26
LBX1P52954 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.7■□□□□ 0.26
LBX1P52954 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.7■□□□□ 0.26
LBX1P52954 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.7■□□□□ 0.26
LBX1P52954 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.7■□□□□ 0.26
LBX1P52954 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.7■□□□□ 0.26
LBX1P52954 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 MIR645-201ENST00000385283 94 ntBASIC16.7■□□□□ 0.26
LBX1P52954 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC16.7■□□□□ 0.26
LBX1P52954 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.7■□□□□ 0.26
LBX1P52954 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.7■□□□□ 0.26
LBX1P52954 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.7■□□□□ 0.26
LBX1P52954 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.7■□□□□ 0.26
LBX1P52954 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 NAT9-219ENST00000582524 573 ntTSL 4 BASIC16.7■□□□□ 0.26
LBX1P52954 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.7■□□□□ 0.26
LBX1P52954 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.7■□□□□ 0.26
LBX1P52954 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC16.7■□□□□ 0.26
LBX1P52954 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LBX1P52954 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LBX1P52954 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LBX1P52954 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 AL137783.1-201ENST00000623494 1896 ntBASIC16.69■□□□□ 0.26
LBX1P52954 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.69■□□□□ 0.26
LBX1P52954 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
LBX1P52954 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.69■□□□□ 0.26
LBX1P52954 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.69■□□□□ 0.26
LBX1P52954 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC16.69■□□□□ 0.26
LBX1P52954 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms