Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
BRCC3P46736 MIR663B-201ENST00000408361 115 ntBASIC16.12■□□□□ 0.17
BRCC3P46736 AC079178.1-201ENST00000420915 656 ntBASIC16.12■□□□□ 0.17
BRCC3P46736 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.12■□□□□ 0.17
BRCC3P46736 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.12■□□□□ 0.17
BRCC3P46736 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.12■□□□□ 0.17
BRCC3P46736 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.12■□□□□ 0.17
BRCC3P46736 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRCC3P46736 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.12■□□□□ 0.17
BRCC3P46736 MIR4683-201ENST00000579659 81 ntBASIC16.12■□□□□ 0.17
BRCC3P46736 AC103810.3-201ENST00000583567 96 ntBASIC16.12■□□□□ 0.17
BRCC3P46736 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRCC3P46736 ZACNP1-201ENST00000612259 710 ntBASIC16.12■□□□□ 0.17
BRCC3P46736 AC244157.2-201ENST00000616239 1006 ntBASIC16.12■□□□□ 0.17
BRCC3P46736 AP001002.3-201ENST00000623482 206 ntBASIC16.12■□□□□ 0.17
BRCC3P46736 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRCC3P46736 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.12■□□□□ 0.17
BRCC3P46736 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRCC3P46736 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
BRCC3P46736 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRCC3P46736 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
BRCC3P46736 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRCC3P46736 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
BRCC3P46736 REXO1L2P-201ENST00000425429 2069 ntBASIC16.12■□□□□ 0.17
BRCC3P46736 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
BRCC3P46736 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRCC3P46736 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRCC3P46736 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRCC3P46736 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
BRCC3P46736 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.11■□□□□ 0.17
BRCC3P46736 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.11■□□□□ 0.17
BRCC3P46736 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
BRCC3P46736 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.11■□□□□ 0.17
BRCC3P46736 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.11■□□□□ 0.17
BRCC3P46736 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BRCC3P46736 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.11■□□□□ 0.17
BRCC3P46736 AC100850.1-201ENST00000506768 649 ntBASIC16.11■□□□□ 0.17
BRCC3P46736 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
BRCC3P46736 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.11■□□□□ 0.17
BRCC3P46736 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.11■□□□□ 0.17
BRCC3P46736 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.11■□□□□ 0.17
BRCC3P46736 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.11■□□□□ 0.17
BRCC3P46736 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.11■□□□□ 0.17
BRCC3P46736 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.11■□□□□ 0.17
BRCC3P46736 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.11■□□□□ 0.17
BRCC3P46736 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
BRCC3P46736 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BRCC3P46736 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.11■□□□□ 0.17
BRCC3P46736 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 LILRP1-201ENST00000444199 1370 ntBASIC16.11■□□□□ 0.17
BRCC3P46736 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
BRCC3P46736 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
BRCC3P46736 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BRCC3P46736 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
BRCC3P46736 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRCC3P46736 AC126365.1-201ENST00000578585 1514 ntBASIC16.1■□□□□ 0.17
BRCC3P46736 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRCC3P46736 AC020910.5-201ENST00000623668 1865 ntBASIC16.1■□□□□ 0.17
BRCC3P46736 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRCC3P46736 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.1■□□□□ 0.17
BRCC3P46736 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRCC3P46736 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BRCC3P46736 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRCC3P46736 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRCC3P46736 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.1■□□□□ 0.17
BRCC3P46736 AC004945.1-201ENST00000416738 983 ntBASIC16.1■□□□□ 0.17
BRCC3P46736 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.1■□□□□ 0.17
BRCC3P46736 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
BRCC3P46736 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.1■□□□□ 0.17
BRCC3P46736 KRT8P13-201ENST00000463294 1010 ntBASIC16.1■□□□□ 0.17
BRCC3P46736 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.1■□□□□ 0.17
BRCC3P46736 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.1■□□□□ 0.17
BRCC3P46736 AP001258.2-201ENST00000529891 490 ntBASIC16.1■□□□□ 0.17
BRCC3P46736 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.1■□□□□ 0.17
BRCC3P46736 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.1■□□□□ 0.17
BRCC3P46736 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.1■□□□□ 0.17
BRCC3P46736 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.1■□□□□ 0.17
BRCC3P46736 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.1■□□□□ 0.17
BRCC3P46736 AC009093.2-202ENST00000620513 2079 ntBASIC16.1■□□□□ 0.17
BRCC3P46736 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.1■□□□□ 0.17
BRCC3P46736 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
BRCC3P46736 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms