Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRNA3P32297 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CHRNA3P32297 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 Z97205.2-201ENST00000564697 1639 ntBASIC16.1■□□□□ 0.17
CHRNA3P32297 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CHRNA3P32297 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
CHRNA3P32297 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRNA3P32297 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHRNA3P32297 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.1■□□□□ 0.17
CHRNA3P32297 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRNA3P32297 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.1■□□□□ 0.17
CHRNA3P32297 DFFBP1-201ENST00000433250 979 ntBASIC16.1■□□□□ 0.17
CHRNA3P32297 AC093004.1-201ENST00000508850 424 ntBASIC16.1■□□□□ 0.17
CHRNA3P32297 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRNA3P32297 API5-211ENST00000534695 560 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRNA3P32297 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.1■□□□□ 0.17
CHRNA3P32297 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRNA3P32297 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRNA3P32297 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRNA3P32297 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.1■□□□□ 0.17
CHRNA3P32297 AC139749.1-202ENST00000617529 3139 ntBASIC16.1■□□□□ 0.17
CHRNA3P32297 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRNA3P32297 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHRNA3P32297 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRNA3P32297 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHRNA3P32297 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRNA3P32297 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRNA3P32297 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
CHRNA3P32297 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.09■□□□□ 0.17
CHRNA3P32297 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.09■□□□□ 0.17
CHRNA3P32297 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.09■□□□□ 0.17
CHRNA3P32297 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 TARDBPP1-201ENST00000442013 1203 ntBASIC16.09■□□□□ 0.17
CHRNA3P32297 AL589987.1-201ENST00000453380 819 ntBASIC16.09■□□□□ 0.17
CHRNA3P32297 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.09■□□□□ 0.17
CHRNA3P32297 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.09■□□□□ 0.17
CHRNA3P32297 AP005018.1-201ENST00000525475 301 ntBASIC16.09■□□□□ 0.17
CHRNA3P32297 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.09■□□□□ 0.17
CHRNA3P32297 TIMM17BP1-201ENST00000545713 516 ntBASIC16.09■□□□□ 0.17
CHRNA3P32297 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.09■□□□□ 0.17
CHRNA3P32297 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.09■□□□□ 0.17
CHRNA3P32297 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.09■□□□□ 0.17
CHRNA3P32297 AC025048.6-201ENST00000634326 1161 ntBASIC16.09■□□□□ 0.17
CHRNA3P32297 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHRNA3P32297 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHRNA3P32297 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 BX640514.1-201ENST00000583223 1918 ntBASIC16.09■□□□□ 0.17
CHRNA3P32297 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CHRNA3P32297 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHRNA3P32297 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRNA3P32297 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRNA3P32297 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHRNA3P32297 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.08■□□□□ 0.17
CHRNA3P32297 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CHRNA3P32297 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CHRNA3P32297 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms