Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC6A4P31645 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SLC6A4P31645 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC6A4P31645 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SLC6A4P31645 AL391280.1-201ENST00000506969 1062 ntBASIC15.57■□□□□ 0.08
SLC6A4P31645 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.57■□□□□ 0.08
SLC6A4P31645 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC6A4P31645 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC6A4P31645 DUX4L45-201ENST00000566406 1057 ntBASIC15.57■□□□□ 0.08
SLC6A4P31645 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC6A4P31645 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC6A4P31645 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC6A4P31645 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 LINC00554-201ENST00000564841 3011 ntBASIC15.57■□□□□ 0.08
SLC6A4P31645 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC6A4P31645 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC6A4P31645 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SLC6A4P31645 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SLC6A4P31645 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SLC6A4P31645 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SLC6A4P31645 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SLC6A4P31645 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC6A4P31645 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SLC6A4P31645 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SLC6A4P31645 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC6A4P31645 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
SLC6A4P31645 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC6A4P31645 FAM8A4P-201ENST00000435433 1213 ntBASIC15.56■□□□□ 0.08
SLC6A4P31645 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A4P31645 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.56■□□□□ 0.08
SLC6A4P31645 AC106820.3-201ENST00000561653 397 ntBASIC15.56■□□□□ 0.08
SLC6A4P31645 C2orf69P2-201ENST00000562032 1123 ntBASIC15.56■□□□□ 0.08
SLC6A4P31645 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A4P31645 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC6A4P31645 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC6A4P31645 AC010328.2-201ENST00000597698 1111 ntBASIC15.56■□□□□ 0.08
SLC6A4P31645 OR10B1P-201ENST00000601666 907 ntBASIC15.56■□□□□ 0.08
SLC6A4P31645 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 AC138466.3-201ENST00000619983 221 ntBASIC15.56■□□□□ 0.08
SLC6A4P31645 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A4P31645 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SLC6A4P31645 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC6A4P31645 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC6A4P31645 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SLC6A4P31645 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC6A4P31645 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC6A4P31645 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC6A4P31645 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
SLC6A4P31645 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC6A4P31645 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SLC6A4P31645 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC6A4P31645 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A4P31645 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC6A4P31645 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC6A4P31645 AC023090.2-201ENST00000625182 2110 ntBASIC15.55■□□□□ 0.08
SLC6A4P31645 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SLC6A4P31645 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC6A4P31645 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms