Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HOXC8P31273 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXC8P31273 AC013726.1-201ENST00000563747 2285 ntBASIC16.32■□□□□ 0.2
HOXC8P31273 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
HOXC8P31273 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXC8P31273 AC012044.1-201ENST00000603431 297 ntBASIC16.32■□□□□ 0.2
HOXC8P31273 AL590440.2-201ENST00000641973 1595 ntBASIC16.32■□□□□ 0.2
HOXC8P31273 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HOXC8P31273 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HOXC8P31273 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXC8P31273 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC8P31273 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HOXC8P31273 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC8P31273 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HOXC8P31273 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXC8P31273 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC8P31273 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC8P31273 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
HOXC8P31273 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXC8P31273 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXC8P31273 RN7SL258P-201ENST00000478664 300 ntBASIC16.31■□□□□ 0.2
HOXC8P31273 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXC8P31273 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HOXC8P31273 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HOXC8P31273 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HOXC8P31273 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HOXC8P31273 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXC8P31273 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HOXC8P31273 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXC8P31273 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HOXC8P31273 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HOXC8P31273 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 AC006480.2-201ENST00000609770 1337 ntBASIC16.3■□□□□ 0.2
HOXC8P31273 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 AC026316.1-201ENST00000398900 414 ntBASIC16.3■□□□□ 0.2
HOXC8P31273 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 KRT18P36-201ENST00000411618 1276 ntBASIC16.3■□□□□ 0.2
HOXC8P31273 XBP1P1-201ENST00000436573 652 ntBASIC16.3■□□□□ 0.2
HOXC8P31273 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.3■□□□□ 0.2
HOXC8P31273 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC8P31273 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC8P31273 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXC8P31273 AC133540.1-201ENST00000620845 1019 ntBASIC16.3■□□□□ 0.2
HOXC8P31273 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXC8P31273 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC8P31273 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC8P31273 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms