Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC092896.1-201ENST00000465850 380 ntBASIC19.37■□□□□ 0.69
RXRBP28702 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RXRBP28702 AC026412.1-206ENST00000502273 206 ntBASIC19.37■□□□□ 0.69
RXRBP28702 HINT1-205ENST00000508488 703 ntTSL 2 BASIC19.37■□□□□ 0.69
RXRBP28702 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC19.37■□□□□ 0.69
RXRBP28702 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.37■□□□□ 0.69
RXRBP28702 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
RXRBP28702 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC19.37■□□□□ 0.69
RXRBP28702 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC19.37■□□□□ 0.69
RXRBP28702 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC19.37■□□□□ 0.69
RXRBP28702 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC19.37■□□□□ 0.69
RXRBP28702 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.37■□□□□ 0.69
RXRBP28702 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.37■□□□□ 0.69
RXRBP28702 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RXRBP28702 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.37■□□□□ 0.69
RXRBP28702 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RXRBP28702 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RXRBP28702 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RXRBP28702 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RXRBP28702 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.36■□□□□ 0.69
RXRBP28702 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.36■□□□□ 0.69
RXRBP28702 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.36■□□□□ 0.69
RXRBP28702 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.36■□□□□ 0.69
RXRBP28702 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 ME2P1-201ENST00000426028 1970 ntBASIC19.36■□□□□ 0.69
RXRBP28702 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC19.36■□□□□ 0.69
RXRBP28702 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC19.36■□□□□ 0.69
RXRBP28702 RPS23-207ENST00000511844 530 ntTSL 2 BASIC19.36■□□□□ 0.69
RXRBP28702 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 AC078814.4-201ENST00000546650 327 ntBASIC19.36■□□□□ 0.69
RXRBP28702 AC120498.5-201ENST00000561757 299 ntBASIC19.36■□□□□ 0.69
RXRBP28702 BX088702.1-201ENST00000610784 235 ntBASIC19.36■□□□□ 0.69
RXRBP28702 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.36■□□□□ 0.69
RXRBP28702 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RXRBP28702 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 AC005332.8-201ENST00000622750 2735 ntBASIC19.36■□□□□ 0.69
RXRBP28702 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 AC141586.5-201ENST00000624546 2050 ntBASIC19.36■□□□□ 0.69
RXRBP28702 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RXRBP28702 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.35■□□□□ 0.69
RXRBP28702 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
RXRBP28702 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.35■□□□□ 0.69
RXRBP28702 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RXRBP28702 MED15P3-201ENST00000413613 326 ntBASIC19.35■□□□□ 0.69
RXRBP28702 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC19.35■□□□□ 0.69
RXRBP28702 RN7SL173P-201ENST00000461853 292 ntBASIC19.35■□□□□ 0.69
RXRBP28702 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RXRBP28702 MIR2278-201ENST00000516344 96 ntBASIC19.35■□□□□ 0.69
RXRBP28702 AC003686.1-201ENST00000550956 1034 ntBASIC19.35■□□□□ 0.69
RXRBP28702 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC19.35■□□□□ 0.69
RXRBP28702 AC124068.2-201ENST00000569473 1109 ntBASIC19.35■□□□□ 0.69
RXRBP28702 EEF1DP7-201ENST00000580496 513 ntBASIC19.35■□□□□ 0.69
RXRBP28702 AC006116.2-201ENST00000589958 988 ntBASIC19.35■□□□□ 0.69
RXRBP28702 AC006986.1-201ENST00000612764 241 ntBASIC19.35■□□□□ 0.69
RXRBP28702 AL357143.1-203ENST00000639750 881 ntBASIC19.35■□□□□ 0.69
RXRBP28702 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RXRBP28702 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.35■□□□□ 0.69
RXRBP28702 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RXRBP28702 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.35■□□□□ 0.69
RXRBP28702 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RXRBP28702 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.35■□□□□ 0.69
RXRBP28702 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC19.34■□□□□ 0.69
RXRBP28702 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.34■□□□□ 0.69
RXRBP28702 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC19.34■□□□□ 0.69
RXRBP28702 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 AC139713.2-201ENST00000641328 2723 ntBASIC19.34■□□□□ 0.69
RXRBP28702 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RXRBP28702 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RXRBP28702 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms