Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.31□□□□□ -0.12
CHMP24386 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.31□□□□□ -0.12
CHMP24386 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.31□□□□□ -0.12
CHMP24386 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CHMP24386 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.31□□□□□ -0.12
CHMP24386 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.31□□□□□ -0.12
CHMP24386 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.31□□□□□ -0.12
CHMP24386 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CHMP24386 WASH3P-207ENST00000560956 1394 ntBASIC14.31□□□□□ -0.12
CHMP24386 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CHMP24386 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CHMP24386 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.3□□□□□ -0.12
CHMP24386 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.3□□□□□ -0.12
CHMP24386 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 SPDYE19P-201ENST00000338590 713 ntBASIC14.3□□□□□ -0.12
CHMP24386 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.3□□□□□ -0.12
CHMP24386 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.3□□□□□ -0.12
CHMP24386 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.3□□□□□ -0.12
CHMP24386 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.3□□□□□ -0.12
CHMP24386 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CHMP24386 MEIS3P1-201ENST00000495167 958 ntBASIC14.3□□□□□ -0.12
CHMP24386 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.3□□□□□ -0.12
CHMP24386 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CHMP24386 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.3□□□□□ -0.12
CHMP24386 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 AF228730.6-201ENST00000641497 218 ntBASIC14.3□□□□□ -0.12
CHMP24386 AC084121.3-201ENST00000641716 218 ntBASIC14.3□□□□□ -0.12
CHMP24386 AC105233.6-201ENST00000642093 218 ntBASIC14.3□□□□□ -0.12
CHMP24386 ACE3P-201ENST00000423435 1973 ntBASIC14.3□□□□□ -0.12
CHMP24386 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CHMP24386 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CHMP24386 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.3□□□□□ -0.12
CHMP24386 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.3□□□□□ -0.12
CHMP24386 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.3□□□□□ -0.12
CHMP24386 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHMP24386 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CHMP24386 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CHMP24386 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.29□□□□□ -0.12
CHMP24386 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CHMP24386 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP24386 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP24386 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP24386 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CHMP24386 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.29□□□□□ -0.12
CHMP24386 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.29□□□□□ -0.12
CHMP24386 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.29□□□□□ -0.12
CHMP24386 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP24386 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CHMP24386 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CHMP24386 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHMP24386 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.29□□□□□ -0.12
CHMP24386 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms