Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH3P22223 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CDH3P22223 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.03■□□□□ -0
CDH3P22223 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH3P22223 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.03■□□□□ -0
CDH3P22223 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH3P22223 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.02■□□□□ -0
CDH3P22223 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.02■□□□□ -0
CDH3P22223 AC007326.2-201ENST00000624224 7579 ntBASIC15.02■□□□□ -0
CDH3P22223 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CDH3P22223 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.02■□□□□ -0
CDH3P22223 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH3P22223 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH3P22223 KRT8P22-201ENST00000562317 1415 ntBASIC15.02■□□□□ -0
CDH3P22223 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.02■□□□□ -0
CDH3P22223 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH3P22223 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH3P22223 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDH3P22223 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CDH3P22223 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.02■□□□□ -0
CDH3P22223 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH3P22223 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH3P22223 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CDH3P22223 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.02■□□□□ -0
CDH3P22223 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.02■□□□□ -0
CDH3P22223 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.02■□□□□ -0
CDH3P22223 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.02■□□□□ -0
CDH3P22223 VDAC1P7-201ENST00000462417 847 ntBASIC15.02■□□□□ -0
CDH3P22223 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH3P22223 AL359711.2-201ENST00000563105 872 ntBASIC15.02■□□□□ -0
CDH3P22223 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.02■□□□□ -0
CDH3P22223 AC015910.1-201ENST00000579400 975 ntBASIC15.02■□□□□ -0
CDH3P22223 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
CDH3P22223 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.02■□□□□ -0
CDH3P22223 CU634019.7-201ENST00000624153 1185 ntBASIC15.02■□□□□ -0
CDH3P22223 FP236241.2-201ENST00000624906 1185 ntBASIC15.02■□□□□ -0
CDH3P22223 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH3P22223 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.02□□□□□ -0.01
CDH3P22223 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH3P22223 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH3P22223 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH3P22223 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH3P22223 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH3P22223 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.02□□□□□ -0.01
CDH3P22223 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH3P22223 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH3P22223 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CDH3P22223 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CDH3P22223 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CDH3P22223 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.02□□□□□ -0.01
CDH3P22223 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH3P22223 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH3P22223 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDH3P22223 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH3P22223 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDH3P22223 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDH3P22223 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH3P22223 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
CDH3P22223 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH3P22223 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDH3P22223 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDH3P22223 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDH3P22223 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 GK-202ENST00000378941 458 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH3P22223 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.01□□□□□ -0.01
CDH3P22223 SOCS2P1-201ENST00000417727 557 ntBASIC15.01□□□□□ -0.01
CDH3P22223 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH3P22223 AC007389.4-201ENST00000454674 793 ntBASIC15.01□□□□□ -0.01
CDH3P22223 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH3P22223 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH3P22223 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH3P22223 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH3P22223 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.01□□□□□ -0.01
CDH3P22223 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
CDH3P22223 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH3P22223 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH3P22223 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH3P22223 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDH3P22223 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH3P22223 AP005117.1-202ENST00000581724 1908 ntBASIC15.01□□□□□ -0.01
CDH3P22223 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH3P22223 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms