Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20■□□□□ 0.79
CSB-PGBD3P0DP91 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20■□□□□ 0.79
CSB-PGBD3P0DP91 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSB-PGBD3P0DP91 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CSB-PGBD3P0DP91 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSB-PGBD3P0DP91 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSB-PGBD3P0DP91 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSB-PGBD3P0DP91 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSB-PGBD3P0DP91 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 KLF2P1-201ENST00000447438 1042 ntBASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 AC009779.1-201ENST00000551138 283 ntBASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 AC103691.2-201ENST00000618824 433 ntBASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CSB-PGBD3P0DP91 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 VDAC1P1-201ENST00000439229 848 ntBASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 AC098935.1-201ENST00000446057 611 ntBASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 HLA-J-204ENST00000495278 958 ntBASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 RN7SL736P-201ENST00000613111 269 ntBASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 AC011491.1-203ENST00000637688 543 ntBASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 TBC1D3J-201ENST00000620719 1426 ntBASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 MBLAC2-202ENST00000514906 1936 ntBASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.98■□□□□ 0.79
CSB-PGBD3P0DP91 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 AC026316.1-201ENST00000398900 414 ntBASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms