Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 AL645937.2-201ENST00000396808 931 ntBASIC16.71■□□□□ 0.27
CLTAP09496 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.71■□□□□ 0.27
CLTAP09496 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.71■□□□□ 0.27
CLTAP09496 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLTAP09496 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.71■□□□□ 0.27
CLTAP09496 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.71■□□□□ 0.27
CLTAP09496 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLTAP09496 KRT17P8-201ENST00000540749 863 ntBASIC16.71■□□□□ 0.27
CLTAP09496 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.71■□□□□ 0.27
CLTAP09496 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.71■□□□□ 0.27
CLTAP09496 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.71■□□□□ 0.27
CLTAP09496 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.71■□□□□ 0.27
CLTAP09496 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.71■□□□□ 0.27
CLTAP09496 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CLTAP09496 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLTAP09496 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLTAP09496 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLTAP09496 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CLTAP09496 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CLTAP09496 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLTAP09496 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
CLTAP09496 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.7■□□□□ 0.26
CLTAP09496 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.7■□□□□ 0.26
CLTAP09496 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CLTAP09496 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLTAP09496 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CLTAP09496 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 GK-202ENST00000378941 458 ntTSL 3 BASIC16.7■□□□□ 0.26
CLTAP09496 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.7■□□□□ 0.26
CLTAP09496 AC005229.1-201ENST00000392885 409 ntBASIC16.7■□□□□ 0.26
CLTAP09496 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.7■□□□□ 0.26
CLTAP09496 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.7■□□□□ 0.26
CLTAP09496 GPR53P-205ENST00000457298 1084 ntBASIC16.7■□□□□ 0.26
CLTAP09496 AP001889.1-201ENST00000525414 633 ntBASIC16.7■□□□□ 0.26
CLTAP09496 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.7■□□□□ 0.26
CLTAP09496 AL022328.1-201ENST00000610050 478 ntBASIC16.7■□□□□ 0.26
CLTAP09496 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.7■□□□□ 0.26
CLTAP09496 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.7■□□□□ 0.26
CLTAP09496 PRSS30P-206ENST00000641773 873 ntBASIC16.7■□□□□ 0.26
CLTAP09496 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLTAP09496 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 MSTO2P-201ENST00000314835 1709 ntBASIC16.7■□□□□ 0.26
CLTAP09496 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLTAP09496 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CLTAP09496 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.7■□□□□ 0.26
CLTAP09496 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.69■□□□□ 0.26
CLTAP09496 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 AC018665.1-201ENST00000622927 1362 ntBASIC16.69■□□□□ 0.26
CLTAP09496 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.69■□□□□ 0.26
CLTAP09496 AC079776.1-201ENST00000401540 1152 ntBASIC16.69■□□□□ 0.26
CLTAP09496 AC112492.5-201ENST00000421897 457 ntBASIC16.69■□□□□ 0.26
CLTAP09496 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 KRT43P-201ENST00000434019 910 ntBASIC16.69■□□□□ 0.26
CLTAP09496 AL355864.2-201ENST00000447420 863 ntBASIC16.69■□□□□ 0.26
CLTAP09496 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.69■□□□□ 0.26
CLTAP09496 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLTAP09496 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.69■□□□□ 0.26
CLTAP09496 RAB43P1-201ENST00000561790 589 ntBASIC16.69■□□□□ 0.26
CLTAP09496 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.69■□□□□ 0.26
CLTAP09496 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.69■□□□□ 0.26
CLTAP09496 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms