Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 HOMER2P2-201ENST00000451621 847 ntBASIC14.35□□□□□ -0.11
CTSBP07858 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 MESTP3-201ENST00000503460 968 ntBASIC14.35□□□□□ -0.11
CTSBP07858 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.35□□□□□ -0.11
CTSBP07858 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.35□□□□□ -0.11
CTSBP07858 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSBP07858 MIR4683-201ENST00000579659 81 ntBASIC14.35□□□□□ -0.11
CTSBP07858 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSBP07858 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.35□□□□□ -0.11
CTSBP07858 GPR182-203ENST00000622922 591 ntBASIC14.35□□□□□ -0.11
CTSBP07858 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 KRT8P4-201ENST00000509735 1454 ntBASIC14.35□□□□□ -0.11
CTSBP07858 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CTSBP07858 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CTSBP07858 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTSBP07858 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.35□□□□□ -0.11
CTSBP07858 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSBP07858 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 AGAP7P-201ENST00000582299 2062 ntBASIC14.34□□□□□ -0.11
CTSBP07858 AGAP14-201ENST00000624701 2060 ntBASIC14.34□□□□□ -0.11
CTSBP07858 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 BRWD1P1-201ENST00000401091 371 ntBASIC14.34□□□□□ -0.11
CTSBP07858 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSBP07858 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.34□□□□□ -0.11
CTSBP07858 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSBP07858 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CTSBP07858 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSBP07858 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSBP07858 PPY2P-201ENST00000582808 702 ntBASIC14.34□□□□□ -0.11
CTSBP07858 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CTSBP07858 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.34□□□□□ -0.11
CTSBP07858 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.34□□□□□ -0.11
CTSBP07858 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CTSBP07858 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CTSBP07858 AL023775.1-201ENST00000454907 1746 ntBASIC14.34□□□□□ -0.11
CTSBP07858 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTSBP07858 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.34□□□□□ -0.11
CTSBP07858 AC011840.2-201ENST00000563063 1520 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms