Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL606495.2-201ENST00000605867 535 ntBASIC17.83■□□□□ 0.44
HLA-DOAP06340 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.83■□□□□ 0.44
HLA-DOAP06340 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
HLA-DOAP06340 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DOAP06340 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DOAP06340 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DOAP06340 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DOAP06340 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DOAP06340 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DOAP06340 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DOAP06340 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DOAP06340 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DOAP06340 TMBIM7P-203ENST00000641617 1718 ntBASIC17.83■□□□□ 0.44
HLA-DOAP06340 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DOAP06340 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DOAP06340 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DOAP06340 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DOAP06340 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DOAP06340 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 C18orf15-201ENST00000623680 2534 ntBASIC17.82■□□□□ 0.44
HLA-DOAP06340 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 LILRP1-201ENST00000444199 1370 ntBASIC17.82■□□□□ 0.44
HLA-DOAP06340 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 AC138696.2-201ENST00000607376 223 ntBASIC17.82■□□□□ 0.44
HLA-DOAP06340 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 AC002472.3-201ENST00000640124 621 ntBASIC17.82■□□□□ 0.44
HLA-DOAP06340 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 AC126365.1-201ENST00000578585 1514 ntBASIC17.82■□□□□ 0.44
HLA-DOAP06340 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DOAP06340 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DOAP06340 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.81■□□□□ 0.44
HLA-DOAP06340 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 MIR4683-201ENST00000579659 81 ntBASIC17.81■□□□□ 0.44
HLA-DOAP06340 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DOAP06340 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
HLA-DOAP06340 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 AC023024.2-201ENST00000623561 1993 ntBASIC17.8■□□□□ 0.44
HLA-DOAP06340 AC112693.3-201ENST00000624819 1983 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms