Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
TCRAP04437 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
TCRAP04437 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.55
TCRAP04437 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
TCRAP04437 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.65□□□□□ -0.55
TCRAP04437 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
TCRAP04437 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.65□□□□□ -0.55
TCRAP04437 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
TCRAP04437 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
TCRAP04437 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
TCRAP04437 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
TCRAP04437 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 AL133267.1-201ENST00000398220 340 ntBASIC11.64□□□□□ -0.55
TCRAP04437 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.64□□□□□ -0.55
TCRAP04437 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.64□□□□□ -0.55
TCRAP04437 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
TCRAP04437 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 SLED1-202ENST00000512051 380 ntBASIC11.64□□□□□ -0.55
TCRAP04437 SLC25A39P2-201ENST00000537614 270 ntBASIC11.64□□□□□ -0.55
TCRAP04437 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.64□□□□□ -0.55
TCRAP04437 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.64□□□□□ -0.55
TCRAP04437 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 UXT-AS1-201ENST00000590504 1525 ntBASIC11.64□□□□□ -0.55
TCRAP04437 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 AC011474.4-201ENST00000623523 2076 ntBASIC11.64□□□□□ -0.55
TCRAP04437 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.64□□□□□ -0.55
TCRAP04437 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.64□□□□□ -0.55
TCRAP04437 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.64□□□□□ -0.55
TCRAP04437 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TCRAP04437 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.63□□□□□ -0.55
TCRAP04437 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 AL137784.3-201ENST00000623858 2288 ntBASIC11.63□□□□□ -0.55
TCRAP04437 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
TCRAP04437 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
TCRAP04437 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
TCRAP04437 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.63□□□□□ -0.55
TCRAP04437 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.63□□□□□ -0.55
TCRAP04437 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
TCRAP04437 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.63□□□□□ -0.55
TCRAP04437 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.63□□□□□ -0.55
TCRAP04437 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
TCRAP04437 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.63□□□□□ -0.55
TCRAP04437 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TCRAP04437 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
TCRAP04437 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms