Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.34□□□□□ -0.11
PDGFAP04085 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 ACKR1-201ENST00000368121 1240 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.34□□□□□ -0.11
PDGFAP04085 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PDGFAP04085 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 KRT18P43-201ENST00000469825 1281 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.34□□□□□ -0.11
PDGFAP04085 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.34□□□□□ -0.11
PDGFAP04085 RNA5SP423-201ENST00000517127 109 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 AC078819.1-201ENST00000547454 765 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 AC012085.1-201ENST00000548270 765 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.34□□□□□ -0.11
PDGFAP04085 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 AC107373.2-201ENST00000607735 490 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PDGFAP04085 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.34□□□□□ -0.11
PDGFAP04085 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.34□□□□□ -0.11
PDGFAP04085 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.34□□□□□ -0.11
PDGFAP04085 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.34□□□□□ -0.11
PDGFAP04085 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFAP04085 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PDGFAP04085 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDGFAP04085 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.33□□□□□ -0.11
PDGFAP04085 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
PDGFAP04085 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.33□□□□□ -0.11
PDGFAP04085 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.33□□□□□ -0.11
PDGFAP04085 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PDGFAP04085 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDGFAP04085 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDGFAP04085 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 AC018892.3-201ENST00000623986 2499 ntBASIC14.33□□□□□ -0.12
PDGFAP04085 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PDGFAP04085 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.33□□□□□ -0.12
PDGFAP04085 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.33□□□□□ -0.12
PDGFAP04085 AC007969.1-201ENST00000433675 447 ntBASIC14.33□□□□□ -0.12
PDGFAP04085 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.33□□□□□ -0.12
PDGFAP04085 IGHJ2P-201ENST00000454480 60 ntBASIC14.33□□□□□ -0.12
PDGFAP04085 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 AP001258.2-201ENST00000529891 490 ntBASIC14.33□□□□□ -0.12
PDGFAP04085 AC023310.1-201ENST00000554836 735 ntBASIC14.33□□□□□ -0.12
PDGFAP04085 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.33□□□□□ -0.12
PDGFAP04085 MIR4741-201ENST00000579822 90 ntBASIC14.33□□□□□ -0.12
PDGFAP04085 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 AL022328.3-201ENST00000607943 679 ntBASIC14.33□□□□□ -0.12
PDGFAP04085 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.33□□□□□ -0.12
PDGFAP04085 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.33□□□□□ -0.12
PDGFAP04085 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.33□□□□□ -0.12
PDGFAP04085 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
PDGFAP04085 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 ALOX12P2-203ENST00000570921 1945 ntBASIC14.33□□□□□ -0.12
PDGFAP04085 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFAP04085 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.33□□□□□ -0.12
PDGFAP04085 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PDGFAP04085 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms