Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VTNP04004 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.6■□□□□ 0.25
VTNP04004 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VTNP04004 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.59■□□□□ 0.25
VTNP04004 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 AC020910.5-201ENST00000623668 1865 ntBASIC16.59■□□□□ 0.25
VTNP04004 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VTNP04004 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VTNP04004 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 AC009093.2-202ENST00000620513 2079 ntBASIC16.59■□□□□ 0.25
VTNP04004 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.59■□□□□ 0.25
VTNP04004 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VTNP04004 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.59■□□□□ 0.25
VTNP04004 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VTNP04004 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 AC004945.1-201ENST00000416738 983 ntBASIC16.59■□□□□ 0.25
VTNP04004 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VTNP04004 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.59■□□□□ 0.25
VTNP04004 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.59■□□□□ 0.25
VTNP04004 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.59■□□□□ 0.25
VTNP04004 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.59■□□□□ 0.25
VTNP04004 AL139099.5-201ENST00000635274 300 ntBASIC16.59■□□□□ 0.25
VTNP04004 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.59■□□□□ 0.25
VTNP04004 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
VTNP04004 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VTNP04004 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.59■□□□□ 0.25
VTNP04004 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
VTNP04004 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.59■□□□□ 0.25
VTNP04004 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.58■□□□□ 0.25
VTNP04004 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VTNP04004 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VTNP04004 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VTNP04004 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
VTNP04004 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
VTNP04004 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VTNP04004 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VTNP04004 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.58■□□□□ 0.25
VTNP04004 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VTNP04004 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
VTNP04004 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
VTNP04004 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
VTNP04004 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.58■□□□□ 0.24
VTNP04004 AL136309.1-201ENST00000403917 691 ntBASIC16.58■□□□□ 0.24
VTNP04004 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VTNP04004 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.58■□□□□ 0.24
VTNP04004 POM121L10P-201ENST00000436994 1285 ntBASIC16.58■□□□□ 0.24
VTNP04004 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.58■□□□□ 0.24
VTNP04004 AC004898.1-201ENST00000451057 766 ntBASIC16.58■□□□□ 0.24
VTNP04004 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.58■□□□□ 0.24
VTNP04004 AC005730.2-201ENST00000564549 1184 ntBASIC16.58■□□□□ 0.24
VTNP04004 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.58■□□□□ 0.24
VTNP04004 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.58■□□□□ 0.24
VTNP04004 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.58■□□□□ 0.24
VTNP04004 AL606495.2-201ENST00000605867 535 ntBASIC16.58■□□□□ 0.24
VTNP04004 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.58■□□□□ 0.24
VTNP04004 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 LILRP1-201ENST00000444199 1370 ntBASIC16.58■□□□□ 0.24
VTNP04004 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
VTNP04004 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.58■□□□□ 0.24
VTNP04004 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VTNP04004 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
VTNP04004 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
VTNP04004 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VTNP04004 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
VTNP04004 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
VTNP04004 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VTNP04004 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VTNP04004 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VTNP04004 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VTNP04004 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VTNP04004 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.57■□□□□ 0.24
VTNP04004 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms