Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 CICP24-201ENST00000605464 2705 ntBASIC16.36■□□□□ 0.21
HLA-DRAP01903 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRAP01903 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HLA-DRAP01903 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 FGD5P1-202ENST00000614866 2498 ntBASIC16.35■□□□□ 0.21
HLA-DRAP01903 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 TTTY23B-201ENST00000442790 549 ntBASIC16.35■□□□□ 0.21
HLA-DRAP01903 USP32P1-208ENST00000506594 1164 ntBASIC16.35■□□□□ 0.21
HLA-DRAP01903 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 AC008735.3-201ENST00000596646 500 ntBASIC16.35■□□□□ 0.21
HLA-DRAP01903 AC012645.4-201ENST00000610691 1061 ntBASIC16.35■□□□□ 0.21
HLA-DRAP01903 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 AC013726.1-201ENST00000563747 2285 ntBASIC16.35■□□□□ 0.21
HLA-DRAP01903 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DRAP01903 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRAP01903 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 AC055811.4-201ENST00000624039 1754 ntBASIC16.34■□□□□ 0.21
HLA-DRAP01903 LINC02228-204ENST00000642115 2962 ntBASIC16.34■□□□□ 0.21
HLA-DRAP01903 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 GIMAP3P-201ENST00000495150 836 ntBASIC16.34■□□□□ 0.21
HLA-DRAP01903 AC026434.2-201ENST00000506094 1078 ntBASIC16.34■□□□□ 0.21
HLA-DRAP01903 AP001889.1-201ENST00000525414 633 ntBASIC16.34■□□□□ 0.21
HLA-DRAP01903 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DRAP01903 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRAP01903 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms