Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UPK1BO75841 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UPK1BO75841 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 KHSRPP1-201ENST00000427983 1768 ntBASIC13.28□□□□□ -0.28
UPK1BO75841 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UPK1BO75841 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.28□□□□□ -0.28
UPK1BO75841 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK1BO75841 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UPK1BO75841 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.28□□□□□ -0.28
UPK1BO75841 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.28□□□□□ -0.28
UPK1BO75841 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.28□□□□□ -0.28
UPK1BO75841 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.28□□□□□ -0.28
UPK1BO75841 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 AC011498.5-201ENST00000592027 486 ntBASIC13.28□□□□□ -0.28
UPK1BO75841 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UPK1BO75841 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 AC083849.1-201ENST00000615227 514 ntBASIC13.28□□□□□ -0.28
UPK1BO75841 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK1BO75841 KRT17P2-201ENST00000300992 1314 ntBASIC13.28□□□□□ -0.28
UPK1BO75841 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK1BO75841 AC233702.3-201ENST00000578656 1387 ntBASIC13.28□□□□□ -0.28
UPK1BO75841 AP000437.1-201ENST00000624057 2085 ntBASIC13.28□□□□□ -0.28
UPK1BO75841 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UPK1BO75841 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UPK1BO75841 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UPK1BO75841 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
UPK1BO75841 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 CICP1-201ENST00000416803 2410 ntBASIC13.28□□□□□ -0.28
UPK1BO75841 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK1BO75841 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK1BO75841 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.27□□□□□ -0.28
UPK1BO75841 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK1BO75841 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.27□□□□□ -0.28
UPK1BO75841 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.27□□□□□ -0.28
UPK1BO75841 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.27□□□□□ -0.28
UPK1BO75841 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.27□□□□□ -0.28
UPK1BO75841 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK1BO75841 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UPK1BO75841 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK1BO75841 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK1BO75841 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.27□□□□□ -0.28
UPK1BO75841 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK1BO75841 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK1BO75841 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UPK1BO75841 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.27□□□□□ -0.29
UPK1BO75841 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UPK1BO75841 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.27□□□□□ -0.29
UPK1BO75841 HMGA1P7-201ENST00000406908 502 ntBASIC13.27□□□□□ -0.29
UPK1BO75841 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UPK1BO75841 LIN28AP1-201ENST00000429574 405 ntBASIC13.27□□□□□ -0.29
UPK1BO75841 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.27□□□□□ -0.29
UPK1BO75841 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.27□□□□□ -0.29
UPK1BO75841 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 HNRNPUP1-201ENST00000554987 333 ntBASIC13.27□□□□□ -0.29
UPK1BO75841 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.27□□□□□ -0.29
UPK1BO75841 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.27□□□□□ -0.29
UPK1BO75841 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.27□□□□□ -0.29
UPK1BO75841 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UPK1BO75841 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 NSUN5P1-202ENST00000421140 1535 ntBASIC13.27□□□□□ -0.29
UPK1BO75841 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK1BO75841 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms