Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SMARCA5O60264 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCA5O60264 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.77■□□□□ 0.6
SMARCA5O60264 EIF3FP3-201ENST00000434851 1086 ntBASIC18.77■□□□□ 0.6
SMARCA5O60264 RN7SL837P-201ENST00000463010 287 ntBASIC18.77■□□□□ 0.6
SMARCA5O60264 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.77■□□□□ 0.6
SMARCA5O60264 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.77■□□□□ 0.6
SMARCA5O60264 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCA5O60264 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.77■□□□□ 0.6
SMARCA5O60264 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SMARCA5O60264 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
SMARCA5O60264 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SMARCA5O60264 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SMARCA5O60264 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMARCA5O60264 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SMARCA5O60264 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SMARCA5O60264 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMARCA5O60264 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCA5O60264 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMARCA5O60264 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
SMARCA5O60264 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCA5O60264 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCA5O60264 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SMARCA5O60264 AL035633.1-201ENST00000406139 838 ntBASIC18.76■□□□□ 0.59
SMARCA5O60264 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCA5O60264 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCA5O60264 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 RN7SL692P-201ENST00000464677 288 ntBASIC18.76■□□□□ 0.59
SMARCA5O60264 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SMARCA5O60264 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMARCA5O60264 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCA5O60264 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCA5O60264 AC010319.3-201ENST00000597028 470 ntBASIC18.76■□□□□ 0.59
SMARCA5O60264 AC004466.1-201ENST00000599515 1080 ntBASIC18.76■□□□□ 0.59
SMARCA5O60264 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMARCA5O60264 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCA5O60264 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCA5O60264 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCA5O60264 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SMARCA5O60264 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMARCA5O60264 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCA5O60264 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCA5O60264 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
SMARCA5O60264 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
SMARCA5O60264 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCA5O60264 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCA5O60264 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SMARCA5O60264 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCA5O60264 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.75■□□□□ 0.59
SMARCA5O60264 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCA5O60264 AP006294.1-201ENST00000415407 339 ntBASIC18.75■□□□□ 0.59
SMARCA5O60264 TMEM14DP-201ENST00000422205 345 ntBASIC18.75■□□□□ 0.59
SMARCA5O60264 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
SMARCA5O60264 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.75■□□□□ 0.59
SMARCA5O60264 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.75■□□□□ 0.59
SMARCA5O60264 AL162726.2-201ENST00000438986 1017 ntBASIC18.75■□□□□ 0.59
SMARCA5O60264 AC026434.2-201ENST00000506094 1078 ntBASIC18.75■□□□□ 0.59
SMARCA5O60264 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
SMARCA5O60264 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCA5O60264 AL596325.1-201ENST00000563991 1082 ntBASIC18.75■□□□□ 0.59
SMARCA5O60264 AC132938.2-201ENST00000579188 680 ntBASIC18.75■□□□□ 0.59
SMARCA5O60264 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SMARCA5O60264 AL591163.1-201ENST00000641757 987 ntBASIC18.75■□□□□ 0.59
SMARCA5O60264 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCA5O60264 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCA5O60264 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.75■□□□□ 0.59
SMARCA5O60264 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCA5O60264 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SMARCA5O60264 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCA5O60264 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SMARCA5O60264 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCA5O60264 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCA5O60264 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCA5O60264 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms