Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.87
CHD2O14647 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD2O14647 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD2O14647 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD2O14647 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD2O14647 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD2O14647 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CHD2O14647 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD2O14647 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD2O14647 UROS-201ENST00000368774 744 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD2O14647 RPL35P9-201ENST00000446059 350 ntBASIC20.45■□□□□ 0.86
CHD2O14647 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD2O14647 RN7SL530P-201ENST00000485097 298 ntBASIC20.45■□□□□ 0.86
CHD2O14647 RPL18AP8-201ENST00000486071 528 ntBASIC20.45■□□□□ 0.86
CHD2O14647 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC20.45■□□□□ 0.86
CHD2O14647 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20.45■□□□□ 0.86
CHD2O14647 OR2A1-AS1-210ENST00000496968 531 ntBASIC20.45■□□□□ 0.86
CHD2O14647 IGHV1-12-201ENST00000518307 205 ntBASIC20.45■□□□□ 0.86
CHD2O14647 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
CHD2O14647 SIGLEC22P-201ENST00000599104 714 ntBASIC20.45■□□□□ 0.86
CHD2O14647 MME-218ENST00000625667 363 ntTSL 5 BASIC20.45■□□□□ 0.86
CHD2O14647 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD2O14647 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD2O14647 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD2O14647 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD2O14647 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD2O14647 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CHD2O14647 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CHD2O14647 NME4-203ENST00000397722 1232 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD2O14647 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC20.44■□□□□ 0.86
CHD2O14647 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.44■□□□□ 0.86
CHD2O14647 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD2O14647 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 AC010491.1-201ENST00000563101 2797 ntBASIC20.44■□□□□ 0.86
CHD2O14647 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CHD2O14647 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD2O14647 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD2O14647 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD2O14647 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
CHD2O14647 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD2O14647 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD2O14647 GAS5-209ENST00000430245 723 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD2O14647 RN7SL494P-201ENST00000461517 304 ntBASIC20.43■□□□□ 0.86
CHD2O14647 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD2O14647 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CHD2O14647 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
CHD2O14647 AL139339.2-201ENST00000608063 657 ntBASIC20.43■□□□□ 0.86
CHD2O14647 ST5-261ENST00000626808 1071 ntTSL 5 BASIC20.43■□□□□ 0.86
CHD2O14647 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD2O14647 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHD2O14647 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD2O14647 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD2O14647 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CHD2O14647 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 AC009093.10-201ENST00000641956 1442 ntBASIC20.43■□□□□ 0.86
CHD2O14647 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD2O14647 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD2O14647 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC20.43■□□□□ 0.86
CHD2O14647 SRP14-204ENST00000558720 780 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD2O14647 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC20.43■□□□□ 0.86
CHD2O14647 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD2O14647 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD2O14647 AL136172.1-201ENST00000598590 1394 ntBASIC20.43■□□□□ 0.86
CHD2O14647 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD2O14647 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD2O14647 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.42■□□□□ 0.86
CHD2O14647 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD2O14647 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC20.42■□□□□ 0.86
CHD2O14647 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC20.42■□□□□ 0.86
CHD2O14647 RN7SL23P-201ENST00000484055 275 ntBASIC20.42■□□□□ 0.86
CHD2O14647 OR5BD1P-201ENST00000532527 817 ntBASIC20.42■□□□□ 0.86
CHD2O14647 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC20.42■□□□□ 0.86
CHD2O14647 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD2O14647 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD2O14647 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD2O14647 HELLS-212ENST00000630929 400 ntTSL 5 BASIC20.42■□□□□ 0.86
CHD2O14647 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms