Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN5O00501 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN5O00501 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 POM121L8P-201ENST00000417732 1281 ntBASIC16.03■□□□□ 0.16
CLDN5O00501 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN5O00501 POM121L9P-203ENST00000441984 1285 ntBASIC16.03■□□□□ 0.16
CLDN5O00501 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN5O00501 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN5O00501 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.03■□□□□ 0.16
CLDN5O00501 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN5O00501 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLDN5O00501 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN5O00501 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.03■□□□□ 0.16
CLDN5O00501 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN5O00501 MIR6752-201ENST00000618442 71 ntBASIC16.03■□□□□ 0.16
CLDN5O00501 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CLDN5O00501 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN5O00501 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CLDN5O00501 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLDN5O00501 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN5O00501 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN5O00501 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN5O00501 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CLDN5O00501 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.02■□□□□ 0.16
CLDN5O00501 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN5O00501 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN5O00501 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
CLDN5O00501 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN5O00501 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN5O00501 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN5O00501 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN5O00501 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLDN5O00501 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLDN5O00501 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN5O00501 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN5O00501 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLDN5O00501 AC245100.3-201ENST00000441281 285 ntBASIC16.02■□□□□ 0.16
CLDN5O00501 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN5O00501 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CLDN5O00501 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN5O00501 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.02■□□□□ 0.16
CLDN5O00501 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.02■□□□□ 0.16
CLDN5O00501 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN5O00501 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN5O00501 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN5O00501 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN5O00501 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN5O00501 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN5O00501 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN5O00501 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN5O00501 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN5O00501 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CLDN5O00501 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN5O00501 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLDN5O00501 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN5O00501 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN5O00501 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN5O00501 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN5O00501 LINC00528-201ENST00000600723 2160 ntBASIC16.02■□□□□ 0.15
CLDN5O00501 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN5O00501 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDN5O00501 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CLDN5O00501 AC023157.3-201ENST00000619086 2088 ntBASIC16.01■□□□□ 0.15
CLDN5O00501 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN5O00501 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN5O00501 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN5O00501 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN5O00501 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN5O00501 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN5O00501 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLDN5O00501 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
CLDN5O00501 AC006453.4-201ENST00000636949 1252 ntBASIC16.01■□□□□ 0.15
CLDN5O00501 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN5O00501 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN5O00501 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms