Protein–RNA interactions for Protein: J3KSC0

LINC01387, Putative uncharacterized protein encoded by LINC01387, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01387J3KSC0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 AC012508.2-201ENST00000567613 1472 ntBASIC13.84□□□□□ -0.19
LINC01387J3KSC0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 AC126365.1-201ENST00000578585 1514 ntBASIC13.84□□□□□ -0.19
LINC01387J3KSC0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
LINC01387J3KSC0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01387J3KSC0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01387J3KSC0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01387J3KSC0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.83□□□□□ -0.19
LINC01387J3KSC0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01387J3KSC0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01387J3KSC0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01387J3KSC0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 ACTBP8-201ENST00000403258 1108 ntBASIC13.83□□□□□ -0.2
LINC01387J3KSC0 AL139094.1-201ENST00000405549 1188 ntBASIC13.83□□□□□ -0.2
LINC01387J3KSC0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 USP32P1-208ENST00000506594 1164 ntBASIC13.83□□□□□ -0.2
LINC01387J3KSC0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 AC010327.5-201ENST00000586923 3061 ntBASIC13.83□□□□□ -0.2
LINC01387J3KSC0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 AC005252.3-201ENST00000623855 2258 ntBASIC13.83□□□□□ -0.2
LINC01387J3KSC0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01387J3KSC0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms