Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC003101.2-201ENST00000612557 442 ntBASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 AC084121.4-201ENST00000641598 221 ntBASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 AF228730.8-201ENST00000642140 221 ntBASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV5A0A0B4J249 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 AC074338.1-201ENST00000416825 156 ntBASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 KRT18P64-201ENST00000434946 1219 ntBASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 FAM197Y3-203ENST00000618346 717 ntBASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV5A0A0B4J249 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV5A0A0B4J249 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV5A0A0B4J249 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV5A0A0B4J249 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV5A0A0B4J249 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV5A0A0B4J249 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.51
TRAV5A0A0B4J249 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV5A0A0B4J249 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV5A0A0B4J249 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRAV5A0A0B4J249 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 AC138969.3-201ENST00000546612 1459 ntBASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 AC138932.2-201ENST00000548268 1459 ntBASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 AC126755.4-201ENST00000549796 1459 ntBASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRAV5A0A0B4J249 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms