Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 AC100827.2-201ENST00000563214 1194 ntBASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 RN7SL574P-201ENST00000581512 297 ntBASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 AC004466.1-201ENST00000599515 1080 ntBASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 AC079336.7-201ENST00000623428 1078 ntBASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC187A0A096LP49 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AC026691.1-201ENST00000602502 2017 ntBASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AC004899.1-201ENST00000424687 1714 ntBASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AC091046.1-201ENST00000331871 207 ntBASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 ACTG1P2-201ENST00000415776 1125 ntBASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 ACTG1P11-201ENST00000425411 1125 ntBASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 MARK2P5-201ENST00000507649 634 ntBASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 SPCS2P2-201ENST00000603270 608 ntBASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 AC002472.3-201ENST00000640124 621 ntBASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC187A0A096LP49 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 MIR33B-201ENST00000385104 96 ntBASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms