Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTCH2Q9Y6C5 AC011840.2-201ENST00000563063 1520 ntBASIC16.96■□□□□ 0.3
PTCH2Q9Y6C5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 DGAT2L7P-201ENST00000602462 744 ntBASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 AC009884.2-201ENST00000603110 324 ntBASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTCH2Q9Y6C5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 AC015909.3-201ENST00000572855 1794 ntBASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 AC006158.1-201ENST00000610661 249 ntBASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCH2Q9Y6C5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCH2Q9Y6C5 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.93■□□□□ 0.3
PTCH2Q9Y6C5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCH2Q9Y6C5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.93■□□□□ 0.3
PTCH2Q9Y6C5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCH2Q9Y6C5 AC090502.4-201ENST00000551714 1386 ntBASIC16.93■□□□□ 0.3
PTCH2Q9Y6C5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PTCH2Q9Y6C5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCH2Q9Y6C5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCH2Q9Y6C5 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCH2Q9Y6C5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms