Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 AC015818.8-201ENST00000587907 1519 ntBASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 COX5BP1-201ENST00000507622 393 ntBASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTDP1Q9Y5B0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTDP1Q9Y5B0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 BCYRN1-201ENST00000418539 200 ntBASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 AC007969.1-201ENST00000433675 447 ntBASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 AC006033.1-201ENST00000440505 426 ntBASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 AP001258.2-201ENST00000529891 490 ntBASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 AL603764.1-201ENST00000636452 321 ntBASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 AC055811.4-201ENST00000624039 1754 ntBASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTDP1Q9Y5B0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 AL391005.1-201ENST00000623953 2435 ntBASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTDP1Q9Y5B0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms