Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 BCYRN1-201ENST00000418539 200 ntBASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 Z93015.1-201ENST00000451718 390 ntBASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 AC078819.1-201ENST00000547454 765 ntBASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 AC012085.1-201ENST00000548270 765 ntBASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 AC243960.2-201ENST00000600996 747 ntBASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 AL606495.2-201ENST00000605867 535 ntBASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AL138709.1-201ENST00000614840 1693 ntBASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AL645937.2-201ENST00000396808 931 ntBASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 MIR1247-201ENST00000408206 136 ntBASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AC006033.1-201ENST00000440505 426 ntBASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 KRT8P13-201ENST00000463294 1010 ntBASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 RN7SL48P-201ENST00000579283 293 ntBASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AL022328.3-201ENST00000607943 679 ntBASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AC006453.4-201ENST00000636949 1252 ntBASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
SSX2IPQ9Y2D8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms