Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 DGCR5-201ENST00000399539 862 ntBASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 AL162726.2-201ENST00000438986 1017 ntBASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 AC005252.2-201ENST00000624630 1141 ntBASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 PRSS30P-206ENST00000641773 873 ntBASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AP4E1Q9UPM8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 ENPP7P5-201ENST00000541031 1031 ntBASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 AC138761.1-201ENST00000584393 385 ntBASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 AL161772.1-201ENST00000610494 4412 ntBASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 AL137783.1-201ENST00000623494 1896 ntBASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 CU634019.7-201ENST00000624153 1185 ntBASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 FP236241.2-201ENST00000624906 1185 ntBASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4E1Q9UPM8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms