Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 MIR4649-201ENST00000582839 64 ntBASIC17.15■□□□□ 0.34
CPA4Q9UI42 AL157813.1-201ENST00000612996 587 ntBASIC17.15■□□□□ 0.34
CPA4Q9UI42 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.15■□□□□ 0.34
CPA4Q9UI42 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 CICP11-201ENST00000434745 2827 ntBASIC17.15■□□□□ 0.34
CPA4Q9UI42 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.15■□□□□ 0.34
CPA4Q9UI42 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPA4Q9UI42 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CPA4Q9UI42 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 MIR6720-201ENST00000611664 98 ntBASIC17.14■□□□□ 0.33
CPA4Q9UI42 MIR6769A-201ENST00000617340 73 ntBASIC17.14■□□□□ 0.33
CPA4Q9UI42 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
CPA4Q9UI42 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPA4Q9UI42 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 AL592076.1-201ENST00000424448 303 ntBASIC17.13■□□□□ 0.33
CPA4Q9UI42 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 PIN4P1-201ENST00000451079 396 ntBASIC17.13■□□□□ 0.33
CPA4Q9UI42 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 AC008825.2-201ENST00000603374 718 ntBASIC17.13■□□□□ 0.33
CPA4Q9UI42 MIR6756-201ENST00000616240 63 ntBASIC17.13■□□□□ 0.33
CPA4Q9UI42 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CPA4Q9UI42 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPA4Q9UI42 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPA4Q9UI42 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms