Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 AC004066.1-201ENST00000502488 802 ntBASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 AP001582.1-201ENST00000525856 295 ntBASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 AC093525.8-201ENST00000624099 1342 ntBASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 CU634019.7-201ENST00000624153 1185 ntBASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 AC005252.2-201ENST00000624630 1141 ntBASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 FP236241.2-201ENST00000624906 1185 ntBASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 AL033527.5-201ENST00000641382 801 ntBASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.79□□□□□ -0.04
CUEDC1Q9NWM3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 RPSAP52-203ENST00000622976 1023 ntBASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 AL033527.4-201ENST00000641026 673 ntBASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.78□□□□□ -0.04
CUEDC1Q9NWM3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms