Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 BTNL10-201ENST00000595971 695 ntBASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 AC233724.13-201ENST00000598383 410 ntBASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 AL138709.1-201ENST00000614840 1693 ntBASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ECHDC1Q9NTX5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ECHDC1Q9NTX5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ECHDC1Q9NTX5 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ECHDC1Q9NTX5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
ECHDC1Q9NTX5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
ECHDC1Q9NTX5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 AC092933.1-201ENST00000393644 945 ntBASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 AL355864.2-201ENST00000447420 863 ntBASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 GNRHR2-203ENST00000581100 1187 ntBASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 CICP24-201ENST00000605464 2705 ntBASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC1Q9NTX5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 LINC01101-201ENST00000622953 1884 ntBASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 BCRP2-202ENST00000447763 634 ntBASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 BCRP6-201ENST00000510112 632 ntBASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 BCRP7-201ENST00000511549 544 ntBASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.5■□□□□ 0.55
ECHDC1Q9NTX5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC1Q9NTX5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms