Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.14■□□□□ 0.17
CD248Q9HCU0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.14■□□□□ 0.17
CD248Q9HCU0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.14■□□□□ 0.17
CD248Q9HCU0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.14■□□□□ 0.17
CD248Q9HCU0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD248Q9HCU0 AC017083.2-201ENST00000608069 979 ntBASIC16.14■□□□□ 0.17
CD248Q9HCU0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.14■□□□□ 0.17
CD248Q9HCU0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD248Q9HCU0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD248Q9HCU0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CD248Q9HCU0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
CD248Q9HCU0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 AC092552.1-201ENST00000547243 906 ntBASIC16.13■□□□□ 0.17
CD248Q9HCU0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 AL512343.1-201ENST00000605837 169 ntBASIC16.13■□□□□ 0.17
CD248Q9HCU0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 TMBIM7P-203ENST00000641617 1718 ntBASIC16.13■□□□□ 0.17
CD248Q9HCU0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CD248Q9HCU0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD248Q9HCU0 AC091951.1-201ENST00000512854 2465 ntBASIC16.12■□□□□ 0.17
CD248Q9HCU0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 AC020658.6-201ENST00000623564 1870 ntBASIC16.12■□□□□ 0.17
CD248Q9HCU0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 TIMM17BP1-201ENST00000545713 516 ntBASIC16.12■□□□□ 0.17
CD248Q9HCU0 RAB43P1-201ENST00000561790 589 ntBASIC16.12■□□□□ 0.17
CD248Q9HCU0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 MIR4259-201ENST00000584466 101 ntBASIC16.12■□□□□ 0.17
CD248Q9HCU0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CD248Q9HCU0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 CICP8-201ENST00000455800 2813 ntBASIC16.12■□□□□ 0.17
CD248Q9HCU0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms