Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 AC007292.2-201ENST00000593524 1812 ntBASIC14.09□□□□□ -0.15
TRIM2Q9C040 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 AC009477.1-201ENST00000452936 217 ntBASIC14.09□□□□□ -0.15
TRIM2Q9C040 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 REXO1L4P-201ENST00000605109 1937 ntBASIC14.09□□□□□ -0.15
TRIM2Q9C040 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM2Q9C040 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.15
TRIM2Q9C040 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM2Q9C040 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM2Q9C040 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TRIM2Q9C040 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.08□□□□□ -0.15
TRIM2Q9C040 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 MRPS18AP1-201ENST00000414458 589 ntBASIC14.08□□□□□ -0.16
TRIM2Q9C040 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 AC022144.1-201ENST00000602255 1580 ntBASIC14.08□□□□□ -0.16
TRIM2Q9C040 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM2Q9C040 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM2Q9C040 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM2Q9C040 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM2Q9C040 AL390755.1-201ENST00000623716 2027 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms