Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 AC232323.1-201ENST00000540724 2099 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 REXO1L5P-201ENST00000622260 2098 ntBASIC13.59□□□□□ -0.23
VRK1Q99986 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
VRK1Q99986 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK1Q99986 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.58□□□□□ -0.23
VRK1Q99986 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
VRK1Q99986 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.58□□□□□ -0.23
VRK1Q99986 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VRK1Q99986 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.58□□□□□ -0.24
VRK1Q99986 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.58□□□□□ -0.24
VRK1Q99986 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.58□□□□□ -0.24
VRK1Q99986 AP006294.1-201ENST00000415407 339 ntBASIC13.58□□□□□ -0.24
VRK1Q99986 NME2P1-201ENST00000426182 414 ntBASIC13.58□□□□□ -0.24
VRK1Q99986 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.58□□□□□ -0.24
VRK1Q99986 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.58□□□□□ -0.24
VRK1Q99986 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.58□□□□□ -0.24
VRK1Q99986 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.58□□□□□ -0.24
VRK1Q99986 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
VRK1Q99986 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.58□□□□□ -0.24
VRK1Q99986 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.58□□□□□ -0.24
VRK1Q99986 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.58□□□□□ -0.24
VRK1Q99986 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VRK1Q99986 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
VRK1Q99986 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 LINC00552-201ENST00000625151 2579 ntBASIC13.58□□□□□ -0.24
VRK1Q99986 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
VRK1Q99986 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
VRK1Q99986 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VRK1Q99986 SLC7A15P-201ENST00000424028 1363 ntBASIC13.58□□□□□ -0.24
VRK1Q99986 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
VRK1Q99986 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.57□□□□□ -0.24
VRK1Q99986 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.57□□□□□ -0.24
VRK1Q99986 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.57□□□□□ -0.24
VRK1Q99986 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
VRK1Q99986 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
VRK1Q99986 CU639417.3-201ENST00000624240 1404 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 AC087481.3-201ENST00000602886 1894 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
VRK1Q99986 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VRK1Q99986 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VRK1Q99986 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 AC098614.1-201ENST00000368528 745 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 GK-202ENST00000378941 458 ntTSL 3 BASIC13.57□□□□□ -0.24
VRK1Q99986 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.57□□□□□ -0.24
VRK1Q99986 DGCR5-201ENST00000399539 862 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK1Q99986 HAUS4P1-201ENST00000406739 1145 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.57□□□□□ -0.24
VRK1Q99986 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.57□□□□□ -0.24
VRK1Q99986 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.57□□□□□ -0.24
VRK1Q99986 RN7SL752P-201ENST00000463779 287 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.57□□□□□ -0.24
VRK1Q99986 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.57□□□□□ -0.24
VRK1Q99986 CR383656.12-201ENST00000549567 513 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 AC023310.3-201ENST00000557027 670 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 AC100756.1-201ENST00000562736 682 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 AC138749.3-201ENST00000567691 622 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.57□□□□□ -0.24
VRK1Q99986 AC025048.3-201ENST00000590609 569 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 CHCHD2P3-201ENST00000603038 451 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 AC116165.1-201ENST00000611806 668 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 AC005702.4-201ENST00000618393 416 ntBASIC13.57□□□□□ -0.24
VRK1Q99986 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms