Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 AP000845.1-201ENST00000581677 2131 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 MROH4P-201ENST00000431302 1578 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 AC104457.1-201ENST00000401024 814 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL13Q99616 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
CCL13Q99616 NME2P1-201ENST00000426182 414 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL13Q99616 AC093433.1-201ENST00000458048 571 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 TDH-203ENST00000531764 1110 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 AC005225.4-201ENST00000557330 545 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL13Q99616 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 AP001063.1-201ENST00000568332 529 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 AC132938.2-201ENST00000579188 680 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCL13Q99616 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL13Q99616 AC012645.4-201ENST00000610691 1061 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CCL13Q99616 AL591163.1-201ENST00000641757 987 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CCL13Q99616 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL13Q99616 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL13Q99616 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCL13Q99616 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCL13Q99616 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CCL13Q99616 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL13Q99616 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.78□□□□□ -0.36
CCL13Q99616 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCL13Q99616 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCL13Q99616 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CCL13Q99616 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL13Q99616 REXO1L5P-201ENST00000622260 2098 ntBASIC12.78□□□□□ -0.36
CCL13Q99616 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL13Q99616 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL13Q99616 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL13Q99616 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL13Q99616 AL512384.1-201ENST00000406683 331 ntBASIC12.78□□□□□ -0.36
CCL13Q99616 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 COX5BP8-201ENST00000416911 349 ntBASIC12.78□□□□□ -0.36
CCL13Q99616 NUS1P3-201ENST00000423502 862 ntBASIC12.78□□□□□ -0.36
CCL13Q99616 KRT17P7-201ENST00000451704 1104 ntBASIC12.78□□□□□ -0.36
CCL13Q99616 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL13Q99616 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL13Q99616 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CCL13Q99616 AC009486.1-201ENST00000569860 813 ntBASIC12.78□□□□□ -0.36
CCL13Q99616 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL13Q99616 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL13Q99616 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL13Q99616 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL13Q99616 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL13Q99616 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL13Q99616 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL13Q99616 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms