Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 HLA-K-203ENST00000430151 1046 ntBASIC16.27■□□□□ 0.2
YME1L1Q96TA2 AC069218.1-201ENST00000435269 762 ntBASIC16.27■□□□□ 0.2
YME1L1Q96TA2 AC125604.1-201ENST00000496255 707 ntBASIC16.27■□□□□ 0.2
YME1L1Q96TA2 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 DUX4L47-201ENST00000566374 394 ntBASIC16.27■□□□□ 0.2
YME1L1Q96TA2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 AL358472.3-201ENST00000608147 415 ntBASIC16.27■□□□□ 0.2
YME1L1Q96TA2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 AC002472.3-201ENST00000640124 621 ntBASIC16.27■□□□□ 0.2
YME1L1Q96TA2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
YME1L1Q96TA2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 AC026434.2-201ENST00000506094 1078 ntBASIC16.26■□□□□ 0.19
YME1L1Q96TA2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.26■□□□□ 0.19
YME1L1Q96TA2 AC090857.1-201ENST00000527400 390 ntBASIC16.26■□□□□ 0.19
YME1L1Q96TA2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 AF254983.2-201ENST00000612331 135 ntBASIC16.26■□□□□ 0.19
YME1L1Q96TA2 AL353770.1-201ENST00000614915 403 ntBASIC16.26■□□□□ 0.19
YME1L1Q96TA2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.26■□□□□ 0.19
YME1L1Q96TA2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 PCDHA14-201ENST00000506751 2298 ntBASIC16.25■□□□□ 0.19
YME1L1Q96TA2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
YME1L1Q96TA2 RPL5P21-201ENST00000404620 815 ntBASIC16.25■□□□□ 0.19
YME1L1Q96TA2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms