Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.43□□□□□ -0.1
NR1H4Q96RI1 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NR1H4Q96RI1 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.42□□□□□ -0.1
NR1H4Q96RI1 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 KRT16P4-201ENST00000453883 522 ntBASIC14.42□□□□□ -0.1
NR1H4Q96RI1 FOSL1P1-201ENST00000511041 816 ntBASIC14.42□□□□□ -0.1
NR1H4Q96RI1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H4Q96RI1 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 GHSR-202ENST00000427970 912 ntBASIC14.41□□□□□ -0.1
NR1H4Q96RI1 ATP5G2P1-201ENST00000433580 426 ntBASIC14.41□□□□□ -0.1
NR1H4Q96RI1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 PRYP5-201ENST00000451909 266 ntBASIC14.41□□□□□ -0.1
NR1H4Q96RI1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 AP002469.2-201ENST00000531724 424 ntBASIC14.41□□□□□ -0.1
NR1H4Q96RI1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 AL445228.2-201ENST00000605589 952 ntBASIC14.41□□□□□ -0.1
NR1H4Q96RI1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H4Q96RI1 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms