Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG4P5Q96PW8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 AC018442.1-201ENST00000421439 2061 ntBASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 AC063926.3-201ENST00000624734 5658 ntBASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 AL162726.2-201ENST00000438986 1017 ntBASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 AC114812.1-204ENST00000449669 728 ntBASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSPG4P5Q96PW8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 AC023090.2-201ENST00000625182 2110 ntBASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 DUX4L47-201ENST00000566374 394 ntBASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 AP001063.1-201ENST00000568332 529 ntBASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 AP005019.2-201ENST00000615104 511 ntBASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 AL033527.5-201ENST00000641382 801 ntBASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 LINC00552-201ENST00000625151 2579 ntBASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG4P5Q96PW8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms