Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 CETN4P-206ENST00000642099 2168 ntBASIC13.35□□□□□ -0.27
CPNE2Q96FN4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 AC015910.1-201ENST00000579400 975 ntBASIC13.35□□□□□ -0.27
CPNE2Q96FN4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 CICP20-201ENST00000443330 2801 ntBASIC13.35□□□□□ -0.27
CPNE2Q96FN4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CPNE2Q96FN4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 CICP23-201ENST00000605013 2741 ntBASIC13.34□□□□□ -0.27
CPNE2Q96FN4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 AL390755.1-201ENST00000623716 2027 ntBASIC13.34□□□□□ -0.27
CPNE2Q96FN4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.34□□□□□ -0.27
CPNE2Q96FN4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 AL022342.1-201ENST00000400363 863 ntBASIC13.34□□□□□ -0.27
CPNE2Q96FN4 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 POLD2P1-201ENST00000511220 997 ntBASIC13.34□□□□□ -0.27
CPNE2Q96FN4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 MIR6080-201ENST00000617359 66 ntBASIC13.34□□□□□ -0.27
CPNE2Q96FN4 AC009093.7-201ENST00000623853 1223 ntBASIC13.34□□□□□ -0.27
CPNE2Q96FN4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 LINC00552-201ENST00000625151 2579 ntBASIC13.34□□□□□ -0.27
CPNE2Q96FN4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.34□□□□□ -0.27
CPNE2Q96FN4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms