Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 KRT8P37-201ENST00000451609 1420 ntBASIC13.6□□□□□ -0.23
RFT1Q96AA3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 AL139010.1-201ENST00000454878 894 ntBASIC13.6□□□□□ -0.23
RFT1Q96AA3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 SLC25A39P2-201ENST00000537614 270 ntBASIC13.6□□□□□ -0.23
RFT1Q96AA3 AC040169.1-201ENST00000565382 521 ntBASIC13.6□□□□□ -0.23
RFT1Q96AA3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AC097359.2-201ENST00000604992 2389 ntBASIC13.59□□□□□ -0.23
RFT1Q96AA3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AP3S2-216ENST00000617003 1561 ntBASIC13.59□□□□□ -0.23
RFT1Q96AA3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AL592309.1-201ENST00000443127 649 ntBASIC13.59□□□□□ -0.23
RFT1Q96AA3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 ALG1L5P-201ENST00000482043 771 ntBASIC13.59□□□□□ -0.23
RFT1Q96AA3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms