Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 AC026434.2-201ENST00000506094 1078 ntBASIC13.39□□□□□ -0.27
TMEM54Q969K7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 MIR5189-201ENST00000577370 114 ntBASIC13.39□□□□□ -0.27
TMEM54Q969K7 AC010319.3-201ENST00000597028 470 ntBASIC13.39□□□□□ -0.27
TMEM54Q969K7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 AC055811.4-201ENST00000624039 1754 ntBASIC13.39□□□□□ -0.27
TMEM54Q969K7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 BAATP1-201ENST00000412284 1225 ntBASIC13.38□□□□□ -0.27
TMEM54Q969K7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 AC012441.1-201ENST00000446669 685 ntBASIC13.38□□□□□ -0.27
TMEM54Q969K7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 RN7SL752P-201ENST00000463779 287 ntBASIC13.38□□□□□ -0.27
TMEM54Q969K7 AC011495.1-201ENST00000498085 584 ntBASIC13.38□□□□□ -0.27
TMEM54Q969K7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms