Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.14■□□□□ 0.33
USP6NLQ92738 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP6NLQ92738 AC100827.2-201ENST00000563214 1194 ntBASIC17.14■□□□□ 0.33
USP6NLQ92738 DUX4L46-201ENST00000566845 751 ntBASIC17.14■□□□□ 0.33
USP6NLQ92738 AL132994.2-201ENST00000603120 687 ntBASIC17.14■□□□□ 0.33
USP6NLQ92738 AC073352.2-201ENST00000609385 439 ntBASIC17.14■□□□□ 0.33
USP6NLQ92738 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.14■□□□□ 0.33
USP6NLQ92738 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.14■□□□□ 0.33
USP6NLQ92738 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP6NLQ92738 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP6NLQ92738 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
USP6NLQ92738 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
USP6NLQ92738 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP6NLQ92738 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP6NLQ92738 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.14■□□□□ 0.33
USP6NLQ92738 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
USP6NLQ92738 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
USP6NLQ92738 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
USP6NLQ92738 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP6NLQ92738 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.13■□□□□ 0.33
USP6NLQ92738 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
USP6NLQ92738 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
USP6NLQ92738 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.13■□□□□ 0.33
USP6NLQ92738 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
USP6NLQ92738 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 RN7SKP214-201ENST00000364208 315 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
USP6NLQ92738 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 RPL5P21-201ENST00000404620 815 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.13■□□□□ 0.33
USP6NLQ92738 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.13■□□□□ 0.33
USP6NLQ92738 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.13■□□□□ 0.33
USP6NLQ92738 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.13■□□□□ 0.33
USP6NLQ92738 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 AC116345.2-201ENST00000512837 523 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.13■□□□□ 0.33
USP6NLQ92738 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.13■□□□□ 0.33
USP6NLQ92738 AC242376.1-201ENST00000559033 726 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.13■□□□□ 0.33
USP6NLQ92738 AL136295.7-201ENST00000619226 1200 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 AC002472.3-201ENST00000640124 621 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.13■□□□□ 0.33
USP6NLQ92738 INE2-201ENST00000630399 1874 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 MST1L-201ENST00000442552 2185 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 AL360270.3-201ENST00000609118 1348 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP6NLQ92738 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 SHC1P1-201ENST00000425230 1745 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
USP6NLQ92738 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP6NLQ92738 LINC00554-201ENST00000564841 3011 ntBASIC17.13■□□□□ 0.33
USP6NLQ92738 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
USP6NLQ92738 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.12■□□□□ 0.33
USP6NLQ92738 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.12■□□□□ 0.33
USP6NLQ92738 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.12■□□□□ 0.33
USP6NLQ92738 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.12■□□□□ 0.33
USP6NLQ92738 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.12■□□□□ 0.33
USP6NLQ92738 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
USP6NLQ92738 AC026316.1-201ENST00000398900 414 ntBASIC17.12■□□□□ 0.33
USP6NLQ92738 VDAC1P1-201ENST00000439229 848 ntBASIC17.12■□□□□ 0.33
USP6NLQ92738 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.12■□□□□ 0.33
USP6NLQ92738 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.12■□□□□ 0.33
USP6NLQ92738 HLA-J-204ENST00000495278 958 ntBASIC17.12■□□□□ 0.33
USP6NLQ92738 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.12■□□□□ 0.33
USP6NLQ92738 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.12■□□□□ 0.33
USP6NLQ92738 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
USP6NLQ92738 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 AC138696.2-201ENST00000607376 223 ntBASIC17.12■□□□□ 0.33
USP6NLQ92738 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
USP6NLQ92738 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
USP6NLQ92738 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP6NLQ92738 AC009093.2-202ENST00000620513 2079 ntBASIC17.12■□□□□ 0.33
USP6NLQ92738 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms