Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 AC074386.1-202ENST00000463561 864 ntBASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 AC112191.1-201ENST00000523689 701 ntBASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 AC104692.2-201ENST00000603054 253 ntBASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 AGGF1P1-201ENST00000509500 2073 ntBASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 FO393414.2-201ENST00000405153 598 ntBASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 AL135744.1-201ENST00000565098 629 ntBASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 AP000842.3-202ENST00000569238 1080 ntBASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 AC025181.2-201ENST00000606994 802 ntBASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 AC116407.3-201ENST00000623905 1129 ntBASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CKAP2Q8WWK9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CKAP2Q8WWK9 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CKAP2Q8WWK9 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CKAP2Q8WWK9 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.16■□□□□ 0.02
CKAP2Q8WWK9 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms